COSMIC Mission

COSMIC delivers the next generation of systems medicine professionals who successfully combat complex human disorders. We will focus on B-cell lymphoma and rheumatoid arthritis, diseases that originate from abnormal functioning of the adaptive immune system, in particular the germinal center. COSMIC develops and integrates experimental and computational approaches, and establish a unique cross-fertilization between oncology and auto-immunity. 
 
Download: COSMIC Summary
 
  • COSMIC in numbers

    10 Beneficiaries
    7 Partner Organisations
    14 Early Stage Researchers (ESRs)
        -13 PhD students
        -1 Industrial researcher
    5 Companies
    9 European countries
        -NL, FR, SE, UK, IT, ES, DE, CH, EL
    5 Visiting Scientists
    4 External Trainers
    5 Members of External Advisory Board
    1 Ethics Advisor
  • COSMIC Research Background

    Systems Medicine

    One of the key question in systems biology is how biological systems (e.g., cells, molecular networks, germinal center) operate upon interaction with their external environment. Answering this question will generate knowledge about the dy­namics of complex systems and quantitative and explanatory computer models based on ex­perimental data.

    Systems medicine implements systems biology approaches in medical research and practice. This involves iterative and reciprocal feedback between clinical investigations and practice with computational, statistical and mathematical multiscale analysis and modelling of pathogenetic mechanisms, disease progression and remission, treatment responses, and adverse events as well as disease prevention at the individual patient level.

    Systems medicine aims at a measurable improvement of patient health through systems-based approaches and practice.

    Source: CASyM
    See also: EASyM
    Further reading: Schmitz, U., and Wolkenhauer, O. eds. (2016). Systems Medicine (New York: Springer)

    Adaptive immunity
    Germinal Center
    B-cell lymphoma
    Rheumatoid Arthritis
    Computational modelling
  • COSMIC Systems Medicine

    Through collaboration with existing systems medicine initiatives (e.g. EASyM, ISBE) COSMIC researchers contribute to systems medicine infrastructure and best practices that reduce time and costs to address clinical needs.

    At the same time this will promote Europe’s position in the health domain.
  • COSMIC Training

    An important aim of the Marie Sklodowska-Curie Action European Training Network (ETN) is to train young researchers (Early Stage Researchers, ESRs) with multi-disciplinary and multi-sectorial scientific and transferable skills required in systems medicine and translational medicine (WP2).

    COSMIC delivers 14 highly skilled systems medicine professionals who are able to address and solve complex clinical questions and to shape the next generation of systems medicine scientists.

 

The Consortium

The COSMIC consortium comprises 10 Beneficiaries and 7 Partner Organisations. The beneficiaries appoint 14 Early Stage Researchers (mostly PhD students) that carry out the research programme.  The Partner Organisations collaborate as part of the training and/or research programme. 

 

10 Beneficiaries

Beneficiary Organisation Website Country Department Principle Investigator
B1

Academic Medical

Center (AMC)

    NL Bioinformatics Laboratory

Prof. dr. Antoine van Kampen

Coordinator

              Dept. of Pathology

Dr. Jeroen Guikema

Deputy coordinator

WP3 leader (B-cell Lymphoma)

             

Rheumatology and clinical

immunology

Dr. Niek de Vries
B2

Research Centre

Inria (INRIA)

    FR DRACULA team

Dr. Olivier Gandrillon

Dr. Fabien. Crauste

B3 Karolinska institute (KI)     SE

Dept. of Medical Biochemistry

and Biophysics

Prof. dr. Rikard Holmdahl

WP4 leader (Rheumatoid Arthritis)

B4 Babraham Institute (BI)     UK

Lymphocyte signalling

and development

Dr. Martin Turner
B5

FIRC Institute of

Molecular Oncology (IFOM) 

    IT

Genetics of B cells and

lymphomas

Dr. S. Casola
B6

Anaxomics

Biotech S.L. (ANX)

    ES   Dr. Judith Farres
B7 Redoxis AB (RDX)     SE   Dr. Malin Hultqvist Hopkins
B8

Helmholtz Centre for

Infection Research (HZI)

    DE Systems Immunology

Prof. dr. Michael Meyer-Hermann

WP5 leader (Computational modelling)

B9 IBM      CH   Dr. María Rodríguez Martínez
B10

Centre for Research and

Technology Hellas (CERTH)

    EL

Institute of Applied

Biosciences

Dr. Kostas Stamatopoulos

 

7 Partner Organisations

PO Organisation Website Country Contact
P01. Elevate Health (ELH)     Elevate logo NL

Ruben L.G. Callens

Eva van Ingen

PO2. KNIME AG     KNIME Logo CoW SNR CH Prof. dr. Michael. Berthold
PO3. SURFsara     NL

Prof. dr. ir. Anwar Osseyran

Carlos Teijeiro Barjas 

P04. Science Matters   ScienceMatters Logo NL

Nadine Bongaerts

Eva Brinkman

PO5. DTL projects     NL Dr. Celia van Gelder
PO6. ImmunoWell (IW)     NL Dr. Tjitske Bezema
PO7. Vivia Biotech (VB)     ES Dr. Joan Ballesteros

COSMIC NEWS

29 April 2018 2646

EASyM conference

2nd Conference of the European Association of Systems Medicine (EASYM) This conference is…
27 January 2018 2096

Andien Vaes: new controller

New controller: Andien Vaes. Andien Vaes (AMR) takes over the tasks of Don van Velzen.…
23 December 2017 656

Biotecture becomes Science Matters

Biotecture becomes Science Matters Our Partner Organisation Biotecture changed their name…

COSMIC Highlights

22 February 2019 137

CERTH Highschool students

Highschool students at CERTH Rerun by popular demand. Bastien of PLANT.ID did so well…
11 February 2018 1471

COSMIC Coffee Mug

First COSMIC Merchandise During the kickoff meeting (8-9 February) all participants…
11 February 2018 793

Kickoff meeting

COSMIC kickoff meeting. 8-9 February, 2018 Amsterdam COSMIC officially started 1st of…

Events

06 May 2018 557

5th European Congress of Immunology

5th European Congress of Immunology 2-5 september 2018 | Amsterdam RAI Exhibition and…
29 April 2018 991

EASyM 2nd conference

2nd Conference of the European Association of Systems Medicine (EASYM) 7 - 9 November…
16 March 2018 1420

Workshop Applying bioinformatics and data science competency frameworks to ELIXIR Training

Workshop Applying bioinformatics and data science competency frameworks to ELIXIR…

 

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    Project coordination

    Prof. dr. A.H.C. van Kampen (Antoine)
    Bioinformatics Laboratory
    E: a.h.vankampen at amc.uva.nl
    P: +31 20 5667096

    Project management:
    Dr. Laurian Jongejan
    Department of Experimental Immunology
    E: l.zuidmeer at amc.uva.nl
    P: +31 20 5666819

    The Netherlands
    Academic Medical Center, University of Amsterdam

    Marie Skłodowska-Curie Actions

    The Marie Skłodowska-Curie actions (MSCA), named after the double Nobel Prize winning Polish-French scientist famed for her work on radioactivity, support researchers at all stages of their careers. One type of action is the European Training Network (ETN) aimed at joint research training by partners from academia, industry, and other organisation. ETNs facilitate the the researcher to experience different sectors and develop their transferable skills by working on joint research projects.

    H2020

    COSMIC is a European Training Network funded from the European Union's Horizon 2020 research and innovation programme under grant agreement No 765158.









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